WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56D12.4c.1 Sequence Name  F56D12.4c.1
Length (nt)  1107   Chromosome Location  II: 1339699-1350035
Chromosome . Primary Identifier  II Chromosome Location . Start  1339699
Chromosome Location . End  1350035 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56D12.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002176 jip-1 F56D12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56D12.4c F56D12.4c 1107   II: 1339699-1339810

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F56D12.4c.1 1339699 1350035 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon40852   112   II: 1339699-1339810 Caenorhabditis elegans
Exon40857   267   II: 1346070-1346336 Caenorhabditis elegans
Exon40865   82   II: 1347329-1347410 Caenorhabditis elegans
Exon40869   77   II: 1347471-1347547 Caenorhabditis elegans
Exon40875   108   II: 1347596-1347703 Caenorhabditis elegans
Exon40881   209   II: 1348497-1348705 Caenorhabditis elegans
Exon40889   80   II: 1349481-1349560 Caenorhabditis elegans
Exon40895   99   II: 1349617-1349715 Caenorhabditis elegans
Exon40899   73   II: 1349963-1350035 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F56D12.4c.1 1339699 1350035 1

1 Sequence

Length
1107

1 Sequence Ontology Term

Identifier Name Description
transcript