WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56D12.4d.1 Sequence Name  F56D12.4d.1
Length (nt)  3100   Chromosome Location  II: 1326989-1350132
Chromosome . Primary Identifier  II Chromosome Location . Start  1326989
Chromosome Location . End  1350132 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56D12.4d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002176 jip-1 F56D12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56D12.4d F56D12.4d 2991   II: 1327001-1327096

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F56D12.4d.1 1326989 1350132 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon40819   108   II: 1326989-1327096 Caenorhabditis elegans
Exon40823   213   II: 1327837-1328049 Caenorhabditis elegans
Exon40825   161   II: 1328667-1328827 Caenorhabditis elegans
Exon40827   158   II: 1329414-1329571 Caenorhabditis elegans
Exon40829   165   II: 1330324-1330488 Caenorhabditis elegans
Exon40831   108   II: 1331052-1331159 Caenorhabditis elegans
Exon40833   194   II: 1331243-1331436 Caenorhabditis elegans
Exon40836   299   II: 1332372-1332670 Caenorhabditis elegans
Exon40841   197   II: 1337065-1337261 Caenorhabditis elegans
Exon40846   280   II: 1337393-1337672 Caenorhabditis elegans
Exon40850   125   II: 1339686-1339810 Caenorhabditis elegans
Exon40858   267   II: 1346070-1346336 Caenorhabditis elegans
Exon40866   82   II: 1347329-1347410 Caenorhabditis elegans
Exon40870   77   II: 1347471-1347547 Caenorhabditis elegans
Exon40876   108   II: 1347596-1347703 Caenorhabditis elegans
Exon40882   209   II: 1348497-1348705 Caenorhabditis elegans
Exon40890   80   II: 1349481-1349560 Caenorhabditis elegans
Exon40896   99   II: 1349617-1349715 Caenorhabditis elegans
Exon40904   170   II: 1349963-1350132 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F56D12.4d.1 1326989 1350132 1

1 Sequence

Length
3100

1 Sequence Ontology Term

Identifier Name Description
transcript