WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F47F6.1d.1 Sequence Name  F47F6.1d.1
Length (nt)  1965   Chromosome Location  II: 1234175-1252359
Chromosome . Primary Identifier  II Chromosome Location . Start  1234175
Chromosome Location . End  1252359 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47F6.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018572 lin-42 F47F6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47F6.1d F47F6.1d 1965   II: 1234175-1234429

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F47F6.1d.1 1234175 1252359 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon40597   255   II: 1234175-1234429 Caenorhabditis elegans
Exon40601   142   II: 1234584-1234725 Caenorhabditis elegans
Exon40605   90   II: 1235662-1235751 Caenorhabditis elegans
Exon40610   371   II: 1236019-1236389 Caenorhabditis elegans
Exon40617   275   II: 1239949-1240223 Caenorhabditis elegans
Exon40620   107   II: 1240701-1240807 Caenorhabditis elegans
Exon40624   186   II: 1241207-1241392 Caenorhabditis elegans
Exon40629   302   II: 1243372-1243673 Caenorhabditis elegans
Exon40633   86   II: 1243950-1244035 Caenorhabditis elegans
Exon40637   151   II: 1252209-1252359 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F47F6.1d.1 1234175 1252359 -1

1 Sequence

Length
1965

1 Sequence Ontology Term

Identifier Name Description
transcript