WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09E8.1a.1 Sequence Name  C09E8.1a.1
Length (nt)  2505   Chromosome Location  II: 556485-564061
Chromosome . Primary Identifier  II Chromosome Location . Start  556485
Chromosome Location . End  564061 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09E8.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015644 C09E8.1 C09E8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09E8.1a C09E8.1a 2352   II: 556552-556640

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09E8.1a.1 556485 564061 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon39158   156   II: 556485-556640 Caenorhabditis elegans
Exon39161   119   II: 557024-557142 Caenorhabditis elegans
Exon39163   146   II: 557303-557448 Caenorhabditis elegans
Exon39165   92   II: 557502-557593 Caenorhabditis elegans
Exon39167   352   II: 558200-558551 Caenorhabditis elegans
Exon39169   132   II: 558604-558735 Caenorhabditis elegans
Exon39171   207   II: 559306-559512 Caenorhabditis elegans
Exon39173   129   II: 559559-559687 Caenorhabditis elegans
Exon39175   91   II: 560031-560121 Caenorhabditis elegans
Exon39177   137   II: 560169-560305 Caenorhabditis elegans
Exon39183   219   II: 561834-562052 Caenorhabditis elegans
Exon39185   323   II: 562538-562860 Caenorhabditis elegans
Exon39187   128   II: 563115-563242 Caenorhabditis elegans
Exon39189   274   II: 563788-564061 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09E8.1a.1 556485 564061 1

1 Sequence

Length
2505

1 Sequence Ontology Term

Identifier Name Description
transcript