WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T27A1.5a.1 Sequence Name  T27A1.5a.1
Length (nt)  1486   Chromosome Location  II: 522602-525981
Chromosome . Primary Identifier  II Chromosome Location . Start  522602
Chromosome Location . End  525981 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27A1.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020837 slc-36.2 T27A1.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T27A1.5a T27A1.5a 1350   II: 522612-522910

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T27A1.5a.1 522602 525981 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon39082   309   II: 522602-522910 Caenorhabditis elegans
Exon39085   356   II: 523470-523825 Caenorhabditis elegans
Exon39087   274   II: 524406-524679 Caenorhabditis elegans
Exon39089   106   II: 524933-525038 Caenorhabditis elegans
Exon39091   64   II: 525214-525277 Caenorhabditis elegans
Exon39094   377   II: 525605-525981 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T27A1.5a.1 522602 525981 1

1 Sequence

Length
1486

1 Sequence Ontology Term

Identifier Name Description
transcript