WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y43H11AL.3a.2 Sequence Name  Y43H11AL.3a.2
Length (nt)  7052   Chromosome Location  II: 240705-263663
Chromosome . Primary Identifier  II Chromosome Location . Start  240705
Chromosome Location . End  263663 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43H11AL.3a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004166 scc-2 Y43H11AL.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43H11AL.3a Y43H11AL.3a 6531   II: 241114-241257

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y43H11AL.3a.2 240705 263663 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

27 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon38337   553   II: 240705-241257 Caenorhabditis elegans
Exon38345   169   II: 241831-241999 Caenorhabditis elegans
Exon38348   269   II: 242049-242317 Caenorhabditis elegans
Exon38351   212   II: 242367-242578 Caenorhabditis elegans
Exon38354   259   II: 243236-243494 Caenorhabditis elegans
Exon38358   326   II: 243680-244005 Caenorhabditis elegans
Exon38360   255   II: 245056-245310 Caenorhabditis elegans
Exon38362   217   II: 245364-245580 Caenorhabditis elegans
Exon38364   321   II: 245831-246151 Caenorhabditis elegans
Exon38366   170   II: 246594-246763 Caenorhabditis elegans
Exon38368   232   II: 246850-247081 Caenorhabditis elegans
Exon38370   102   II: 247429-247530 Caenorhabditis elegans
Exon38372   216   II: 247579-247794 Caenorhabditis elegans
Exon38375   192   II: 247880-248071 Caenorhabditis elegans
Exon38377   393   II: 248122-248514 Caenorhabditis elegans
Exon38379   291   II: 249534-249824 Caenorhabditis elegans
Exon38382   215   II: 249871-250085 Caenorhabditis elegans
Exon38384   337   II: 250713-251049 Caenorhabditis elegans
Exon38386   409   II: 251441-251849 Caenorhabditis elegans
Exon38388   307   II: 251921-252227 Caenorhabditis elegans
Exon38390   377   II: 252326-252702 Caenorhabditis elegans
Exon38392   157   II: 253213-253369 Caenorhabditis elegans
Exon38394   202   II: 253675-253876 Caenorhabditis elegans
Exon38396   324   II: 254292-254615 Caenorhabditis elegans
Exon38398   231   II: 254700-254930 Caenorhabditis elegans
Exon38399   216   II: 254979-255194 Caenorhabditis elegans
Exon38424   100   II: 263564-263663 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y43H11AL.3a.2 240705 263663 -1

1 Sequence

Length
7052

1 Sequence Ontology Term

Identifier Name Description
transcript