WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48A11.5e.1 Sequence Name  F48A11.5e.1
Length (nt)  1560   Chromosome Location  II: 217318-220137
Chromosome . Primary Identifier  II Chromosome Location . Start  217318
Chromosome Location . End  220137 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48A11.5e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018586 ubxn-3 F48A11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48A11.5e F48A11.5e 1560   II: 217318-217518

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F48A11.5e.1 217318 220137 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon38229   201   II: 217318-217518 Caenorhabditis elegans
Exon38234   210   II: 217572-217781 Caenorhabditis elegans
Exon38239   304   II: 217831-218134 Caenorhabditis elegans
Exon38243   218   II: 218299-218516 Caenorhabditis elegans
Exon38247   135   II: 218568-218702 Caenorhabditis elegans
Exon38251   332   II: 219172-219503 Caenorhabditis elegans
Exon38256   73   II: 219863-219935 Caenorhabditis elegans
Exon38257   87   II: 220051-220137 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F48A11.5e.1 217318 220137 -1

1 Sequence

Length
1560

1 Sequence Ontology Term

Identifier Name Description
transcript