WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48A11.5a.1 Sequence Name  F48A11.5a.1
Length (nt)  2157   Chromosome Location  II: 217049-220667
Chromosome . Primary Identifier  II Chromosome Location . Start  217049
Chromosome Location . End  220667 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48A11.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018586 ubxn-3 F48A11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48A11.5a F48A11.5a 1842   II: 217318-217518

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F48A11.5a.1 217049 220667 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon38225   470   II: 217049-217518 Caenorhabditis elegans
Exon38230   210   II: 217572-217781 Caenorhabditis elegans
Exon38236   304   II: 217831-218134 Caenorhabditis elegans
Exon38240   218   II: 218299-218516 Caenorhabditis elegans
Exon38244   135   II: 218568-218702 Caenorhabditis elegans
Exon38248   332   II: 219172-219503 Caenorhabditis elegans
Exon38253   73   II: 219863-219935 Caenorhabditis elegans
Exon38258   97   II: 220051-220147 Caenorhabditis elegans
Exon38261   215   II: 220304-220518 Caenorhabditis elegans
Exon38264   103   II: 220565-220667 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F48A11.5a.1 217049 220667 -1

1 Sequence

Length
2157

1 Sequence Ontology Term

Identifier Name Description
transcript