WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48A11.1a.1 Sequence Name  F48A11.1a.1
Length (nt)  5523   Chromosome Location  II: 203235-211941
Chromosome . Primary Identifier  II Chromosome Location . Start  203235
Chromosome Location . End  211941 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48A11.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000497 chs-2 F48A11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48A11.1a F48A11.1a 5007   II: 203459-203709

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F48A11.1a.1 203235 211941 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon38161   475   II: 203235-203709 Caenorhabditis elegans
Exon38163   71   II: 204185-204255 Caenorhabditis elegans
Exon38167   271   II: 205413-205683 Caenorhabditis elegans
Exon38170   286   II: 205957-206242 Caenorhabditis elegans
Exon38173   128   II: 206295-206422 Caenorhabditis elegans
Exon38176   424   II: 206832-207255 Caenorhabditis elegans
Exon38179   249   II: 207305-207553 Caenorhabditis elegans
Exon38182   155   II: 207600-207754 Caenorhabditis elegans
Exon38185   321   II: 207800-208120 Caenorhabditis elegans
Exon38188   699   II: 208169-208867 Caenorhabditis elegans
Exon38191   1256   II: 208918-210173 Caenorhabditis elegans
Exon38194   257   II: 210220-210476 Caenorhabditis elegans
Exon38197   99   II: 210523-210621 Caenorhabditis elegans
Exon38200   90   II: 210669-210758 Caenorhabditis elegans
Exon38203   113   II: 211098-211210 Caenorhabditis elegans
Exon38206   148   II: 211259-211406 Caenorhabditis elegans
Exon38211   481   II: 211461-211941 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F48A11.1a.1 203235 211941 1

1 Sequence

Length
5523

1 Sequence Ontology Term

Identifier Name Description
transcript