WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C50D2.9.1 Sequence Name  C50D2.9.1
Length (nt)  1327   Chromosome Location  II: 88529-91519
Chromosome . Primary Identifier  II Chromosome Location . Start  88529
Chromosome Location . End  91519 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50D2.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016812 mcat-1 C50D2.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C50D2.9 C50D2.9 1218   II: 88638-88748

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C50D2.9.1 88529 91519 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon37604   220   II: 88529-88748 Caenorhabditis elegans
Exon37605   177   II: 88862-89038 Caenorhabditis elegans
Exon37606   190   II: 89251-89440 Caenorhabditis elegans
Exon37607   136   II: 89853-89988 Caenorhabditis elegans
Exon37608   173   II: 90040-90212 Caenorhabditis elegans
Exon37609   98   II: 90543-90640 Caenorhabditis elegans
Exon37610   121   II: 90692-90812 Caenorhabditis elegans
Exon37611   212   II: 91308-91519 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C50D2.9.1 88529 91519 -1

1 Sequence

Length
1327

1 Sequence Ontology Term

Identifier Name Description
transcript