WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54E5B.1b.4 Sequence Name  Y54E5B.1b.4
Length (nt)  2581   Chromosome Location  I: 14807480-14815718
Chromosome . Primary Identifier  I Chromosome Location . Start  14807480
Chromosome Location . End  14815718 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E5B.1b.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004889 smp-1 Y54E5B.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54E5B.1b Y54E5B.1b 795   I: 14807480-14807585

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54E5B.1b.4 14807480 14815718 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon36650   106   I: 14807480-14807585 Caenorhabditis elegans
Exon36655   103   I: 14810443-14810545 Caenorhabditis elegans
Exon36661   46   I: 14810821-14810866 Caenorhabditis elegans
Exon36667   326   I: 14810909-14811234 Caenorhabditis elegans
Exon36673   80   I: 14811399-14811478 Caenorhabditis elegans
Exon36679   98   I: 14812262-14812359 Caenorhabditis elegans
Exon36684   149   I: 14812411-14812559 Caenorhabditis elegans
Exon36691   155   I: 14812729-14812883 Caenorhabditis elegans
Exon36696   509   I: 14813321-14813829 Caenorhabditis elegans
Exon36699   47   I: 14814386-14814432 Caenorhabditis elegans
Exon36703   113   I: 14814479-14814591 Caenorhabditis elegans
Exon36708   119   I: 14814642-14814760 Caenorhabditis elegans
Exon36714   168   I: 14814815-14814982 Caenorhabditis elegans
Exon36715   562   I: 14815157-14815718 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54E5B.1b.4 14807480 14815718 1

1 Sequence

Length
2581

1 Sequence Ontology Term

Identifier Name Description
transcript