WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54E5B.1a.1 Sequence Name  Y54E5B.1a.1
Length (nt)  2577   Chromosome Location  I: 14807468-14815756
Chromosome . Primary Identifier  I Chromosome Location . Start  14807468
Chromosome Location . End  14815756 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E5B.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004889 smp-1 Y54E5B.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54E5B.1a Y54E5B.1a 2139   I: 14807480-14807585

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54E5B.1a.1 14807468 14815756 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon36649   118   I: 14807468-14807585 Caenorhabditis elegans
Exon36651   103   I: 14810443-14810545 Caenorhabditis elegans
Exon36657   46   I: 14810821-14810866 Caenorhabditis elegans
Exon36663   326   I: 14810909-14811234 Caenorhabditis elegans
Exon36669   80   I: 14811399-14811478 Caenorhabditis elegans
Exon36675   98   I: 14812262-14812359 Caenorhabditis elegans
Exon36685   142   I: 14812418-14812559 Caenorhabditis elegans
Exon36687   155   I: 14812729-14812883 Caenorhabditis elegans
Exon36693   509   I: 14813321-14813829 Caenorhabditis elegans
Exon36700   113   I: 14814479-14814591 Caenorhabditis elegans
Exon36705   119   I: 14814642-14814760 Caenorhabditis elegans
Exon36712   168   I: 14814815-14814982 Caenorhabditis elegans
Exon36719   600   I: 14815157-14815756 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54E5B.1a.1 14807468 14815756 1

1 Sequence

Length
2577

1 Sequence Ontology Term

Identifier Name Description
transcript