WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54E5B.1b.3 Sequence Name  Y54E5B.1b.3
Length (nt)  1631   Chromosome Location  I: 14807466-14813874
Chromosome . Primary Identifier  I Chromosome Location . Start  14807466
Chromosome Location . End  14813874 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E5B.1b.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004889 smp-1 Y54E5B.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54E5B.1b Y54E5B.1b 795   I: 14807480-14807585

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y54E5B.1b.3 14807466 14813874 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon36646   120   I: 14807466-14807585 Caenorhabditis elegans
Exon36654   103   I: 14810443-14810545 Caenorhabditis elegans
Exon36660   46   I: 14810821-14810866 Caenorhabditis elegans
Exon36666   326   I: 14810909-14811234 Caenorhabditis elegans
Exon36672   80   I: 14811399-14811478 Caenorhabditis elegans
Exon36678   98   I: 14812262-14812359 Caenorhabditis elegans
Exon36683   149   I: 14812411-14812559 Caenorhabditis elegans
Exon36690   155   I: 14812729-14812883 Caenorhabditis elegans
Exon36698   554   I: 14813321-14813874 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y54E5B.1b.3 14807466 14813874 1

1 Sequence

Length
1631

1 Sequence Ontology Term

Identifier Name Description
transcript