WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54E5A.1.1 Sequence Name  Y54E5A.1.1
Length (nt)  1339   Chromosome Location  I: 14688627-14692144
Chromosome . Primary Identifier  I Chromosome Location . Start  14688627
Chromosome Location . End  14692144 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E5A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013197 ttm-5 Y54E5A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54E5A.1 Y54E5A.1 1089   I: 14688798-14688884

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y54E5A.1.1 14688627 14692144 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon36367   258   I: 14688627-14688884 Caenorhabditis elegans
Exon36368   271   I: 14689728-14689998 Caenorhabditis elegans
Exon36370   152   I: 14690406-14690557 Caenorhabditis elegans
Exon36372   173   I: 14690644-14690816 Caenorhabditis elegans
Exon36374   301   I: 14691257-14691557 Caenorhabditis elegans
Exon36376   125   I: 14691610-14691734 Caenorhabditis elegans
Exon36378   59   I: 14692086-14692144 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y54E5A.1.1 14688627 14692144 -1

1 Sequence

Length
1339

1 Sequence Ontology Term

Identifier Name Description
transcript