WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y105E8A.25g.1 Sequence Name  Y105E8A.25g.1
Length (nt)  4417   Chromosome Location  I: 14567368-14604138
Chromosome . Primary Identifier  I Chromosome Location . Start  14567368
Chromosome Location . End  14604138 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105E8A.25g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013682 rhgf-3 Y105E8A.25 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105E8A.25g Y105E8A.25g 4221   I: 14567368-14567497

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8A.25g.1 14567368 14604138 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon36022   130   I: 14567368-14567497 Caenorhabditis elegans
Exon36030   312   I: 14570053-14570364 Caenorhabditis elegans
Exon36036   340   I: 14571439-14571778 Caenorhabditis elegans
Exon36044   222   I: 14572719-14572940 Caenorhabditis elegans
Exon36051   192   I: 14575108-14575299 Caenorhabditis elegans
Exon36058   499   I: 14576119-14576617 Caenorhabditis elegans
Exon36065   689   I: 14577880-14578568 Caenorhabditis elegans
Exon36073   119   I: 14579082-14579200 Caenorhabditis elegans
Exon36080   112   I: 14579463-14579574 Caenorhabditis elegans
Exon36087   91   I: 14585522-14585612 Caenorhabditis elegans
Exon36092   105   I: 14586781-14586885 Caenorhabditis elegans
Exon36097   73   I: 14587067-14587139 Caenorhabditis elegans
Exon36105   107   I: 14590706-14590812 Caenorhabditis elegans
Exon36110   158   I: 14592095-14592252 Caenorhabditis elegans
Exon36114   244   I: 14593328-14593571 Caenorhabditis elegans
Exon36117   353   I: 14595998-14596350 Caenorhabditis elegans
Exon36120   97   I: 14600191-14600287 Caenorhabditis elegans
Exon36123   141   I: 14602064-14602204 Caenorhabditis elegans
Exon36126   71   I: 14602262-14602332 Caenorhabditis elegans
Exon36129   213   I: 14602593-14602805 Caenorhabditis elegans
Exon36132   149   I: 14603990-14604138 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8A.25g.1 14567368 14604138 -1

1 Sequence

Length
4417

1 Sequence Ontology Term

Identifier Name Description
transcript