WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y105E8A.25a.1 Sequence Name  Y105E8A.25a.1
Length (nt)  4717   Chromosome Location  I: 14567169-14616523
Chromosome . Primary Identifier  I Chromosome Location . Start  14567169
Chromosome Location . End  14616523 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105E8A.25a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013682 rhgf-3 Y105E8A.25 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105E8A.25a Y105E8A.25a 4518   I: 14567368-14567497

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8A.25a.1 14567169 14616523 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon36017   329   I: 14567169-14567497 Caenorhabditis elegans
Exon36024   312   I: 14570053-14570364 Caenorhabditis elegans
Exon36031   340   I: 14571439-14571778 Caenorhabditis elegans
Exon36038   222   I: 14572719-14572940 Caenorhabditis elegans
Exon36045   192   I: 14575108-14575299 Caenorhabditis elegans
Exon36052   499   I: 14576119-14576617 Caenorhabditis elegans
Exon36059   689   I: 14577880-14578568 Caenorhabditis elegans
Exon36067   119   I: 14579082-14579200 Caenorhabditis elegans
Exon36075   112   I: 14579463-14579574 Caenorhabditis elegans
Exon36083   91   I: 14585522-14585612 Caenorhabditis elegans
Exon36088   105   I: 14586781-14586885 Caenorhabditis elegans
Exon36093   73   I: 14587067-14587139 Caenorhabditis elegans
Exon36101   107   I: 14590706-14590812 Caenorhabditis elegans
Exon36107   158   I: 14592095-14592252 Caenorhabditis elegans
Exon36112   244   I: 14593328-14593571 Caenorhabditis elegans
Exon36115   353   I: 14595998-14596350 Caenorhabditis elegans
Exon36118   97   I: 14600191-14600287 Caenorhabditis elegans
Exon36121   141   I: 14602064-14602204 Caenorhabditis elegans
Exon36124   71   I: 14602262-14602332 Caenorhabditis elegans
Exon36127   213   I: 14602593-14602805 Caenorhabditis elegans
Exon36130   149   I: 14603990-14604138 Caenorhabditis elegans
Exon36133   101   I: 14616423-14616523 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8A.25a.1 14567169 14616523 -1

1 Sequence

Length
4717

1 Sequence Ontology Term

Identifier Name Description
transcript