WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y105E8A.23b.1 Sequence Name  Y105E8A.23b.1
Length (nt)  3471   Chromosome Location  I: 14552188-14565844
Chromosome . Primary Identifier  I Chromosome Location . Start  14552188
Chromosome Location . End  14565844 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105E8A.23b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013680 rpom-1 Y105E8A.23 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105E8A.23b Y105E8A.23b 3471   I: 14552188-14552347

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8A.23b.1 14552188 14565844 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon35977   160   I: 14552188-14552347 Caenorhabditis elegans
Exon35980   120   I: 14552437-14552556 Caenorhabditis elegans
Exon35984   311   I: 14552860-14553170 Caenorhabditis elegans
Exon35986   54   I: 14553666-14553719 Caenorhabditis elegans
Exon35989   205   I: 14555063-14555267 Caenorhabditis elegans
Exon35993   582   I: 14555936-14556517 Caenorhabditis elegans
Exon35997   595   I: 14558546-14559140 Caenorhabditis elegans
Exon36002   235   I: 14560037-14560271 Caenorhabditis elegans
Exon36005   188   I: 14561209-14561396 Caenorhabditis elegans
Exon36008   706   I: 14563406-14564111 Caenorhabditis elegans
Exon36011   263   I: 14565266-14565528 Caenorhabditis elegans
Exon36013   52   I: 14565793-14565844 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8A.23b.1 14552188 14565844 -1

1 Sequence

Length
3471

1 Sequence Ontology Term

Identifier Name Description
transcript