WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y105E8A.23c.1 Sequence Name  Y105E8A.23c.1
Length (nt)  2076   Chromosome Location  I: 14552188-14560139
Chromosome . Primary Identifier  I Chromosome Location . Start  14552188
Chromosome Location . End  14560139 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105E8A.23c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013680 rpom-1 Y105E8A.23 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105E8A.23c Y105E8A.23c 2076   I: 14552188-14552347

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y105E8A.23c.1 14552188 14560139 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon35976   160   I: 14552188-14552347 Caenorhabditis elegans
Exon35981   120   I: 14552437-14552556 Caenorhabditis elegans
Exon35985   311   I: 14552860-14553170 Caenorhabditis elegans
Exon35990   205   I: 14555063-14555267 Caenorhabditis elegans
Exon35994   582   I: 14555936-14556517 Caenorhabditis elegans
Exon35998   595   I: 14558546-14559140 Caenorhabditis elegans
Exon35999   103   I: 14560037-14560139 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y105E8A.23c.1 14552188 14560139 -1

1 Sequence

Length
2076

1 Sequence Ontology Term

Identifier Name Description
transcript