WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C49A1.4a.1 Sequence Name  C49A1.4a.1
Length (nt)  1810   Chromosome Location  I: 14220693-14231360
Chromosome . Primary Identifier  I Chromosome Location . Start  14220693
Chromosome Location . End  14231360 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C49A1.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001377 eya-1 C49A1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C49A1.4a C49A1.4a 1512   I: 14220873-14220959

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C49A1.4a.1 14220693 14231360 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon35462   267   I: 14220693-14220959 Caenorhabditis elegans
Exon35466   371   I: 14222371-14222741 Caenorhabditis elegans
Exon35470   205   I: 14222816-14223020 Caenorhabditis elegans
Exon35474   327   I: 14223803-14224129 Caenorhabditis elegans
Exon35479   128   I: 14224962-14225089 Caenorhabditis elegans
Exon35483   183   I: 14225135-14225317 Caenorhabditis elegans
Exon35487   110   I: 14226988-14227097 Caenorhabditis elegans
Exon35491   83   I: 14227140-14227222 Caenorhabditis elegans
Exon35496   136   I: 14231225-14231360 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C49A1.4a.1 14220693 14231360 -1

1 Sequence

Length
1810

1 Sequence Ontology Term

Identifier Name Description
transcript