WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C49A1.3.1 Sequence Name  C49A1.3.1
Length (nt)  1462   Chromosome Location  I: 14216701-14220624
Chromosome . Primary Identifier  I Chromosome Location . Start  14216701
Chromosome Location . End  14220624 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C49A1.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008186 best-11 C49A1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C49A1.3 C49A1.3 1335   I: 14216756-14216942

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C49A1.3.1 14216701 14220624 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon35453   242   I: 14216701-14216942 Caenorhabditis elegans
Exon35454   167   I: 14216991-14217157 Caenorhabditis elegans
Exon35455   150   I: 14217207-14217356 Caenorhabditis elegans
Exon35456   201   I: 14218377-14218577 Caenorhabditis elegans
Exon35457   310   I: 14218622-14218931 Caenorhabditis elegans
Exon35458   138   I: 14219756-14219893 Caenorhabditis elegans
Exon35459   125   I: 14219940-14220064 Caenorhabditis elegans
Exon35460   57   I: 14220122-14220178 Caenorhabditis elegans
Exon35461   72   I: 14220553-14220624 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C49A1.3.1 14216701 14220624 -1

1 Sequence

Length
1462

1 Sequence Ontology Term

Identifier Name Description
transcript