WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y6B3B.4.1 Sequence Name  Y6B3B.4.1
Length (nt)  3943   Chromosome Location  I: 13756730-13771773
Chromosome . Primary Identifier  I Chromosome Location . Start  13756730
Chromosome Location . End  13771773 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y6B3B.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012389 scpr-1 Y6B3B.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y6B3B.4 Y6B3B.4 3936   I: 13756737-13756804

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y6B3B.4.1 13756730 13771773 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34658   75   I: 13756730-13756804 Caenorhabditis elegans
Exon34659   106   I: 13756856-13756961 Caenorhabditis elegans
Exon34660   234   I: 13757035-13757268 Caenorhabditis elegans
Exon34661   363   I: 13758119-13758481 Caenorhabditis elegans
Exon34662   147   I: 13758744-13758890 Caenorhabditis elegans
Exon34663   399   I: 13760349-13760747 Caenorhabditis elegans
Exon34665   328   I: 13762134-13762461 Caenorhabditis elegans
Exon34666   194   I: 13763994-13764187 Caenorhabditis elegans
Exon34667   163   I: 13764999-13765161 Caenorhabditis elegans
Exon34668   373   I: 13766569-13766941 Caenorhabditis elegans
Exon34669   1239   I: 13767753-13768991 Caenorhabditis elegans
Exon34670   94   I: 13771117-13771210 Caenorhabditis elegans
Exon34671   228   I: 13771546-13771773 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y6B3B.4.1 13756730 13771773 1

1 Sequence

Length
3943

1 Sequence Ontology Term

Identifier Name Description
transcript