WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y6B3B.5a.2 Sequence Name  Y6B3B.5a.2
Length (nt)  1168   Chromosome Location  I: 13751234-13756243
Chromosome . Primary Identifier  I Chromosome Location . Start  13751234
Chromosome Location . End  13756243 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y6B3B.5a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012390 gpap-1 Y6B3B.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y6B3B.5a Y6B3B.5a 1020   I: 13751336-13751438

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y6B3B.5a.2 13751234 13756243 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34631   205   I: 13751234-13751438 Caenorhabditis elegans
Exon34635   109   I: 13752316-13752424 Caenorhabditis elegans
Exon34638   213   I: 13753551-13753763 Caenorhabditis elegans
Exon34641   96   I: 13754959-13755054 Caenorhabditis elegans
Exon34644   181   I: 13755121-13755301 Caenorhabditis elegans
Exon34647   119   I: 13755347-13755465 Caenorhabditis elegans
Exon34650   112   I: 13755887-13755998 Caenorhabditis elegans
Exon34653   96   I: 13756047-13756142 Caenorhabditis elegans
Exon34656   37   I: 13756207-13756243 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y6B3B.5a.2 13751234 13756243 -1

1 Sequence

Length
1168

1 Sequence Ontology Term

Identifier Name Description
transcript