WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y6B3A.1a.1 Sequence Name  Y6B3A.1a.1
Length (nt)  5206   Chromosome Location  I: 13603843-13626225
Chromosome . Primary Identifier  I Chromosome Location . Start  13603843
Chromosome Location . End  13626225 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y6B3A.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012386 agef-1 Y6B3A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y6B3A.1a Y6B3A.1a 4785   I: 13604237-13604396

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y6B3A.1a.1 13603843 13626225 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34455   554   I: 13603843-13604396 Caenorhabditis elegans
Exon34456   150   I: 13604674-13604823 Caenorhabditis elegans
Exon34457   105   I: 13604884-13604988 Caenorhabditis elegans
Exon34458   279   I: 13605050-13605328 Caenorhabditis elegans
Exon34459   199   I: 13605573-13605771 Caenorhabditis elegans
Exon34460   136   I: 13605821-13605956 Caenorhabditis elegans
Exon34461   295   I: 13606396-13606690 Caenorhabditis elegans
Exon34462   332   I: 13607639-13607970 Caenorhabditis elegans
Exon34463   446   I: 13608910-13609355 Caenorhabditis elegans
Exon34464   464   I: 13616280-13616743 Caenorhabditis elegans
Exon34465   400   I: 13617795-13618194 Caenorhabditis elegans
Exon34466   354   I: 13619613-13619966 Caenorhabditis elegans
Exon34468   101   I: 13620602-13620702 Caenorhabditis elegans
Exon34469   157   I: 13620996-13621152 Caenorhabditis elegans
Exon34472   496   I: 13622103-13622598 Caenorhabditis elegans
Exon34474   114   I: 13623427-13623540 Caenorhabditis elegans
Exon34476   141   I: 13623596-13623736 Caenorhabditis elegans
Exon34478   317   I: 13624797-13625113 Caenorhabditis elegans
Exon34481   166   I: 13626060-13626225 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y6B3A.1a.1 13603843 13626225 -1

1 Sequence

Length
5206

1 Sequence Ontology Term

Identifier Name Description
transcript