WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y87G2A.3b.1 Sequence Name  Y87G2A.3b.1
Length (nt)  1446   Chromosome Location  I: 13537135-13542395
Chromosome . Primary Identifier  I Chromosome Location . Start  13537135
Chromosome Location . End  13542395 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y87G2A.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013595 atg-4.1 Y87G2A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y87G2A.3b Y87G2A.3b 1446   I: 13537135-13537253

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y87G2A.3b.1 13537135 13542395 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34367   119   I: 13537135-13537253 Caenorhabditis elegans
Exon34369   627   I: 13537970-13538596 Caenorhabditis elegans
Exon34371   204   I: 13540329-13540532 Caenorhabditis elegans
Exon34375   142   I: 13541195-13541336 Caenorhabditis elegans
Exon34377   56   I: 13541389-13541444 Caenorhabditis elegans
Exon34379   72   I: 13542047-13542118 Caenorhabditis elegans
Exon34381   226   I: 13542170-13542395 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y87G2A.3b.1 13537135 13542395 -1

1 Sequence

Length
1446

1 Sequence Ontology Term

Identifier Name Description
transcript