WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y87G2A.3a.1 Sequence Name  Y87G2A.3a.1
Length (nt)  1576   Chromosome Location  I: 13536967-13542357
Chromosome . Primary Identifier  I Chromosome Location . Start  13536967
Chromosome Location . End  13542357 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y87G2A.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013595 atg-4.1 Y87G2A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y87G2A.3a Y87G2A.3a 1365   I: 13537135-13537253

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y87G2A.3a.1 13536967 13542357 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34366   287   I: 13536967-13537253 Caenorhabditis elegans
Exon34368   627   I: 13537970-13538596 Caenorhabditis elegans
Exon34370   204   I: 13540329-13540532 Caenorhabditis elegans
Exon34374   142   I: 13541195-13541336 Caenorhabditis elegans
Exon34376   56   I: 13541389-13541444 Caenorhabditis elegans
Exon34378   72   I: 13542047-13542118 Caenorhabditis elegans
Exon34380   188   I: 13542170-13542357 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y87G2A.3a.1 13536967 13542357 -1

1 Sequence

Length
1576

1 Sequence Ontology Term

Identifier Name Description
transcript