WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y40B1A.4.1 Sequence Name  Y40B1A.4.1
Length (nt)  1927   Chromosome Location  I: 13360053-13366888
Chromosome . Primary Identifier  I Chromosome Location . Start  13360053
Chromosome Location . End  13366888 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y40B1A.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012735 sptf-3 Y40B1A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y40B1A.4 Y40B1A.4 1239   I: 13360675-13360843

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y40B1A.4.1 13360053 13366888 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34162   791   I: 13360053-13360843 Caenorhabditis elegans
Exon34163   147   I: 13361682-13361828 Caenorhabditis elegans
Exon34164   161   I: 13362513-13362673 Caenorhabditis elegans
Exon34165   98   I: 13362719-13362816 Caenorhabditis elegans
Exon34166   346   I: 13364114-13364459 Caenorhabditis elegans
Exon34167   156   I: 13365451-13365606 Caenorhabditis elegans
Exon34169   228   I: 13366661-13366888 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y40B1A.4.1 13360053 13366888 -1

1 Sequence

Length
1927

1 Sequence Ontology Term

Identifier Name Description
transcript