WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00044722 Gene Name  C17H1.12
Sequence Name  ? C17H1.12 Organism  Caenorhabditis elegans
Automated Description  Is affected by daf-2 and ints-2 based on microarray and RNA-seq studies. Biotype  SO:0000336
Genetic Position  :± Length (nt)  ? 725
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00044722

Genomics

0 Transcripts

 

Other

0 CDSs

0 RNAi Result

23 Allele

Public Name
gk963849
gk964175
WBVar02120914
WBVar02120442
gk963138
WBVar02123874
WBVar02075492
WBVar02123622
WBVar02075491
tm10578
tm12458
WBVar00160260
gk126418
gk126420
gk126419
cxTi9902
gk934110
gk590845
gk630447
gk337462
gk349387
gk797472
gk912177

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00044722 13127152 13127876 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrI_13127877..13128469   593 I: 13127877-13128469 Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly decreased expression in daf-2(e1370) comparing to in N2. Student's t-test, fold change > 2, p-value < 0.05. WBPaper00055386:daf-2(e1370)_downregulated
  Transcripts that showed significantly increased expression in ints-2(RNAi) comparing to in N2. DESeq2 and edgeR. WBPaper00056284:ints-2(RNAi)_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00044722 13127152 13127876 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
725

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrI_13126651..13127151   501 I: 13126651-13127151 Caenorhabditis elegans