WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17H1.3.1 Sequence Name  C17H1.3.1
Length (nt)  1333   Chromosome Location  I: 13104251-13106465
Chromosome . Primary Identifier  I Chromosome Location . Start  13104251
Chromosome Location . End  13106465 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17H1.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007656 pals-2 C17H1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17H1.3 C17H1.3 1164   I: 13104253-13104337

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C17H1.3.1 13104251 13106465 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon33563   87   I: 13104251-13104337 Caenorhabditis elegans
Exon33564   94   I: 13104384-13104477 Caenorhabditis elegans
Exon33565   148   I: 13104520-13104667 Caenorhabditis elegans
Exon33566   254   I: 13105043-13105296 Caenorhabditis elegans
Exon33567   172   I: 13105357-13105528 Caenorhabditis elegans
Exon33568   168   I: 13105827-13105994 Caenorhabditis elegans
Exon33569   410   I: 13106056-13106465 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C17H1.3.1 13104251 13106465 1

1 Sequence

Length
1333

1 Sequence Ontology Term

Identifier Name Description
transcript