WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W05B5.3a.1 Sequence Name  W05B5.3a.1
Length (nt)  2516   Chromosome Location  I: 13055201-13062122
Chromosome . Primary Identifier  I Chromosome Location . Start  13055201
Chromosome Location . End  13062122 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W05B5.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003675 nhr-85 W05B5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W05B5.3a W05B5.3a 1545   I: 13056151-13056462

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:W05B5.3a.1 13055201 13062122 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon33463   1262   I: 13055201-13056462 Caenorhabditis elegans
Exon33466   372   I: 13057051-13057422 Caenorhabditis elegans
Exon33469   150   I: 13057786-13057935 Caenorhabditis elegans
Exon33471   164   I: 13058016-13058179 Caenorhabditis elegans
Exon33473   145   I: 13058976-13059120 Caenorhabditis elegans
Exon33475   122   I: 13059504-13059625 Caenorhabditis elegans
Exon33477   301   I: 13061822-13062122 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:W05B5.3a.1 13055201 13062122 -1

1 Sequence

Length
2516

1 Sequence Ontology Term

Identifier Name Description
transcript