WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00305630 Gene Name  T27F6.11
Sequence Name  ? T27F6.11 Organism  Caenorhabditis elegans
Biotype  SO:0001263 Genetic Position  I:±
Length (nt)  ? 1045
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00305630

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T27F6.11 T27F6.11 1045   I: 12494825-12495869
 

Other

0 CDSs

0 RNAi Result

26 Allele

Public Name
gk962706
gk963849
gk964175
gk963095
gk344422
gk807345
gk337940
gk336896
gk524252
gk759872
gk570217
gk587245
gk823172
gk895936
gk822576
WBVar01714325
WBVar01714324
WBVar01714323
WBVar01664477
WBVar01664478
WBVar00540898
WBVar00159135
gk125058
gk125057
gk125060
gk125059

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00305630 12494825 12495869 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression after synchronized L4 staged worms were treated with 10 mM caffeine at 25C for 72 hours. DESeq2 WBPaper00067717:caffeine_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00305630 12494825 12495869 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
1045

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrI_12494539..12494824   286 I: 12494539-12494824 Caenorhabditis elegans