WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54C8.2.1 Sequence Name  C54C8.2.1
Length (nt)  1240   Chromosome Location  I: 12444582-12446512
Chromosome . Primary Identifier  I Chromosome Location . Start  12444582
Chromosome Location . End  12446512 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54C8.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008290 bgnt-1.8 C54C8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54C8.2 C54C8.2 1191   I: 12444587-12444673

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C54C8.2.1 12444582 12446512 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon32332   92   I: 12444582-12444673 Caenorhabditis elegans
Exon32333   107   I: 12444723-12444829 Caenorhabditis elegans
Exon32334   193   I: 12445015-12445207 Caenorhabditis elegans
Exon32335   305   I: 12445257-12445561 Caenorhabditis elegans
Exon32336   72   I: 12445616-12445687 Caenorhabditis elegans
Exon32337   117   I: 12445738-12445854 Caenorhabditis elegans
Exon32338   94   I: 12446050-12446143 Caenorhabditis elegans
Exon32339   137   I: 12446211-12446347 Caenorhabditis elegans
Exon32340   123   I: 12446390-12446512 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C54C8.2.1 12444582 12446512 1

1 Sequence

Length
1240

1 Sequence Ontology Term

Identifier Name Description
transcript