WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54C8.1.1 Sequence Name  C54C8.1.1
Length (nt)  1123   Chromosome Location  I: 12442299-12443780
Chromosome . Primary Identifier  I Chromosome Location . Start  12442299
Chromosome Location . End  12443780 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54C8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008289 nhr-169 C54C8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54C8.1 C54C8.1 1071   I: 12442299-12442338

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C54C8.1.1 12442299 12443780 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon32324   40   I: 12442299-12442338 Caenorhabditis elegans
Exon32325   219   I: 12442385-12442603 Caenorhabditis elegans
Exon32326   87   I: 12442649-12442735 Caenorhabditis elegans
Exon32327   170   I: 12442796-12442965 Caenorhabditis elegans
Exon32328   224   I: 12443011-12443234 Caenorhabditis elegans
Exon32329   202   I: 12443290-12443491 Caenorhabditis elegans
Exon32330   75   I: 12443538-12443612 Caenorhabditis elegans
Exon32331   106   I: 12443675-12443780 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C54C8.1.1 12442299 12443780 1

1 Sequence

Length
1123

1 Sequence Ontology Term

Identifier Name Description
transcript