WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C47F8.2.1 Sequence Name  C47F8.2.1
Length (nt)  1130   Chromosome Location  I: 12331085-12333454
Chromosome . Primary Identifier  I Chromosome Location . Start  12331085
Chromosome Location . End  12333454 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C47F8.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008158 nhr-165 C47F8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C47F8.2 C47F8.2 1089   I: 12331085-12331100

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C47F8.2.1 12331085 12333454 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon32058   16   I: 12331085-12331100 Caenorhabditis elegans
Exon32059   228   I: 12331147-12331374 Caenorhabditis elegans
Exon32060   87   I: 12332264-12332350 Caenorhabditis elegans
Exon32061   176   I: 12332396-12332571 Caenorhabditis elegans
Exon32062   227   I: 12332614-12332840 Caenorhabditis elegans
Exon32063   202   I: 12333016-12333217 Caenorhabditis elegans
Exon32064   194   I: 12333261-12333454 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C47F8.2.1 12331085 12333454 1

1 Sequence

Length
1130

1 Sequence Ontology Term

Identifier Name Description
transcript