WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C47F8.8.1 Sequence Name  C47F8.8.1
Length (nt)  1162   Chromosome Location  I: 12327982-12329494
Chromosome . Primary Identifier  I Chromosome Location . Start  12327982
Chromosome Location . End  12329494 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C47F8.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003671 nhr-81 C47F8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C47F8.8 C47F8.8 1044   I: 12328100-12328153

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C47F8.8.1 12327982 12329494 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon32050   172   I: 12327982-12328153 Caenorhabditis elegans
Exon32051   75   I: 12328202-12328276 Caenorhabditis elegans
Exon32052   202   I: 12328341-12328542 Caenorhabditis elegans
Exon32053   227   I: 12328593-12328819 Caenorhabditis elegans
Exon32054   176   I: 12328868-12329043 Caenorhabditis elegans
Exon32055   75   I: 12329094-12329168 Caenorhabditis elegans
Exon32056   66   I: 12329216-12329281 Caenorhabditis elegans
Exon32057   169   I: 12329326-12329494 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C47F8.8.1 12327982 12329494 -1

1 Sequence

Length
1162

1 Sequence Ontology Term

Identifier Name Description
transcript