WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R05D7.5c.1 Sequence Name  R05D7.5c.1
Length (nt)  717   Chromosome Location  I: 12186216-12188742
Chromosome . Primary Identifier  I Chromosome Location . Start  12186216
Chromosome Location . End  12188742 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R05D7.5c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011030 nsph-1.2 R05D7.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R05D7.5c R05D7.5c 717   I: 12186216-12186251

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R05D7.5c.1 12186216 12188742 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon31727   36   I: 12186216-12186251 Caenorhabditis elegans
Exon31730   99   I: 12186297-12186395 Caenorhabditis elegans
Exon31733   140   I: 12186767-12186906 Caenorhabditis elegans
Exon31736   174   I: 12187071-12187244 Caenorhabditis elegans
Exon31739   103   I: 12187296-12187398 Caenorhabditis elegans
Exon31742   90   I: 12187536-12187625 Caenorhabditis elegans
Exon31744   75   I: 12188668-12188742 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R05D7.5c.1 12186216 12188742 1

1 Sequence

Length
717

1 Sequence Ontology Term

Identifier Name Description
transcript