WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R05D7.5a.1 Sequence Name  R05D7.5a.1
Length (nt)  1262   Chromosome Location  I: 12183688-12189008
Chromosome . Primary Identifier  I Chromosome Location . Start  12183688
Chromosome Location . End  12189008 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R05D7.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011030 nsph-1.2 R05D7.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R05D7.5a R05D7.5a 996   I: 12183688-12183865

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R05D7.5a.1 12183688 12189008 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon31722   178   I: 12183688-12183865 Caenorhabditis elegans
Exon31723   91   I: 12185698-12185788 Caenorhabditis elegans
Exon31725   46   I: 12186206-12186251 Caenorhabditis elegans
Exon31728   99   I: 12186297-12186395 Caenorhabditis elegans
Exon31731   140   I: 12186767-12186906 Caenorhabditis elegans
Exon31734   174   I: 12187071-12187244 Caenorhabditis elegans
Exon31737   103   I: 12187296-12187398 Caenorhabditis elegans
Exon31740   90   I: 12187536-12187625 Caenorhabditis elegans
Exon31745   341   I: 12188668-12189008 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R05D7.5a.1 12183688 12189008 1

1 Sequence

Length
1262

1 Sequence Ontology Term

Identifier Name Description
transcript