WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58D5.1a.1 Sequence Name  F58D5.1a.1
Length (nt)  2413   Chromosome Location  I: 12060271-12064897
Chromosome . Primary Identifier  I Chromosome Location . Start  12060271
Chromosome Location . End  12064897 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58D5.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002000 hrpr-1 F58D5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58D5.1a F58D5.1a 1836   I: 12060838-12060952

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F58D5.1a.1 12060271 12064897 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon31425   682   I: 12060271-12060952 Caenorhabditis elegans
Exon31429   231   I: 12061499-12061729 Caenorhabditis elegans
Exon31430   443   I: 12061776-12062218 Caenorhabditis elegans
Exon31431   131   I: 12062766-12062896 Caenorhabditis elegans
Exon31432   136   I: 12063111-12063246 Caenorhabditis elegans
Exon31433   177   I: 12063448-12063624 Caenorhabditis elegans
Exon31434   447   I: 12064231-12064677 Caenorhabditis elegans
Exon31435   166   I: 12064732-12064897 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F58D5.1a.1 12060271 12064897 -1

1 Sequence

Length
2413

1 Sequence Ontology Term

Identifier Name Description
transcript