WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47H9C.5a.1 Sequence Name  Y47H9C.5a.1
Length (nt)  2501   Chromosome Location  I: 11877803-11887278
Chromosome . Primary Identifier  I Chromosome Location . Start  11877803
Chromosome Location . End  11887278 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47H9C.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001045 dnj-27 Y47H9C.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47H9C.5a Y47H9C.5a 2367   I: 11877806-11877964

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y47H9C.5a.1 11877803 11887278 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon31126   162   I: 11877803-11877964 Caenorhabditis elegans
Exon31131   306   I: 11878377-11878682 Caenorhabditis elegans
Exon31132   323   I: 11879784-11880106 Caenorhabditis elegans
Exon31133   248   I: 11880425-11880672 Caenorhabditis elegans
Exon31135   359   I: 11884098-11884456 Caenorhabditis elegans
Exon31136   545   I: 11885017-11885561 Caenorhabditis elegans
Exon31142   558   I: 11886721-11887278 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y47H9C.5a.1 11877803 11887278 1

1 Sequence

Length
2501

1 Sequence Ontology Term

Identifier Name Description
transcript