WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47H9C.4c.1 Sequence Name  Y47H9C.4c.1
Length (nt)  3543   Chromosome Location  I: 11851554-11868105
Chromosome . Primary Identifier  I Chromosome Location . Start  11851554
Chromosome Location . End  11868105 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47H9C.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000415 ced-1 Y47H9C.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47H9C.4c Y47H9C.4c 3138   I: 11851953-11852041

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y47H9C.4c.1 11851554 11868105 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon31092   488   I: 11851554-11852041 Caenorhabditis elegans
Exon31101   209   I: 11855611-11855819 Caenorhabditis elegans
Exon31104   289   I: 11857037-11857325 Caenorhabditis elegans
Exon31107   162   I: 11858455-11858616 Caenorhabditis elegans
Exon31110   1363   I: 11859665-11861027 Caenorhabditis elegans
Exon31113   312   I: 11862793-11863104 Caenorhabditis elegans
Exon31116   266   I: 11864482-11864747 Caenorhabditis elegans
Exon31119   197   I: 11865897-11866093 Caenorhabditis elegans
Exon31122   102   I: 11867068-11867169 Caenorhabditis elegans
Exon31125   155   I: 11867951-11868105 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y47H9C.4c.1 11851554 11868105 -1

1 Sequence

Length
3543

1 Sequence Ontology Term

Identifier Name Description
transcript