WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22H2.5a.1 Sequence Name  T22H2.5a.1
Length (nt)  1315   Chromosome Location  I: 11688673-11690830
Chromosome . Primary Identifier  I Chromosome Location . Start  11688673
Chromosome Location . End  11690830 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22H2.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011935 scrm-1 T22H2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22H2.5a T22H2.5a 870   I: 11689109-11689113

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T22H2.5a.1 11688673 11690830 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon30605   441   I: 11688673-11689113 Caenorhabditis elegans
Exon30610   46   I: 11689345-11689390 Caenorhabditis elegans
Exon30613   59   I: 11689438-11689496 Caenorhabditis elegans
Exon30617   103   I: 11689543-11689645 Caenorhabditis elegans
Exon30621   252   I: 11690052-11690303 Caenorhabditis elegans
Exon30625   414   I: 11690417-11690830 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T22H2.5a.1 11688673 11690830 -1

1 Sequence

Length
1315

1 Sequence Ontology Term

Identifier Name Description
transcript