WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00014147 Gene Name  C17D12.t3
Sequence Name  ? C17D12.t3 Organism  Caenorhabditis elegans
Automated Description  Is affected by rpc-1 based on RNA-seq studies. Biotype  SO:0001272
Genetic Position  :± Length (nt)  ? 82
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This Gene isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00014147

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C17D12.t3 C17D12.t3 82   I: 11585370-11585451
 

Other

0 CDSs

3 RNAi Result

WormBase ID
WBRNAi00040793
WBRNAi00012900
WBRNAi00075921

4 Allele

Public Name
gk962858
gk962706
gk963849
gk963906

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00014147 11585370 11585451 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Small RNAs (less than 200 bases long) that showed significantly decreased expression in rpc-1(RNAi) animals. DESeq2, fold change > 2, FDR < 0.05. WBPaper00067416:rpc-1(RNAi)_downregulated_smallRNA

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00014147 11585370 11585451 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
82

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region