WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y53H1C.2a.1 Sequence Name  Y53H1C.2a.1
Length (nt)  4923   Chromosome Location  I: 11400559-11416427
Chromosome . Primary Identifier  I Chromosome Location . Start  11400559
Chromosome Location . End  11416427 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53H1C.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001215 ego-2 Y53H1C.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53H1C.2a Y53H1C.2a 4479   I: 11400996-11401086

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y53H1C.2a.1 11400559 11416427 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon29752   528   I: 11400559-11401086 Caenorhabditis elegans
Exon29753   137   I: 11402262-11402398 Caenorhabditis elegans
Exon29755   173   I: 11402609-11402781 Caenorhabditis elegans
Exon29757   187   I: 11402834-11403020 Caenorhabditis elegans
Exon29759   1727   I: 11403476-11405202 Caenorhabditis elegans
Exon29761   309   I: 11406169-11406477 Caenorhabditis elegans
Exon29764   150   I: 11408164-11408313 Caenorhabditis elegans
Exon29766   728   I: 11409452-11410179 Caenorhabditis elegans
Exon29768   230   I: 11411339-11411568 Caenorhabditis elegans
Exon29770   156   I: 11412993-11413148 Caenorhabditis elegans
Exon29772   141   I: 11413609-11413749 Caenorhabditis elegans
Exon29774   142   I: 11414917-11415058 Caenorhabditis elegans
Exon29776   128   I: 11416002-11416129 Caenorhabditis elegans
Exon29778   75   I: 11416187-11416261 Caenorhabditis elegans
Exon29780   112   I: 11416316-11416427 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y53H1C.2a.1 11400559 11416427 -1

1 Sequence

Length
4923

1 Sequence Ontology Term

Identifier Name Description
transcript