WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y53H1C.1a.1 Sequence Name  Y53H1C.1a.1
Length (nt)  2087   Chromosome Location  I: 11388682-11396660
Chromosome . Primary Identifier  I Chromosome Location . Start  11388682
Chromosome Location . End  11396660 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53H1C.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000010 aat-9 Y53H1C.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53H1C.1a Y53H1C.1a 1626   I: 11389141-11389238

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y53H1C.1a.1 11388682 11396660 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon29720   557   I: 11388682-11389238 Caenorhabditis elegans
Exon29721   129   I: 11389875-11390003 Caenorhabditis elegans
Exon29723   100   I: 11390089-11390188 Caenorhabditis elegans
Exon29726   187   I: 11390948-11391134 Caenorhabditis elegans
Exon29730   138   I: 11392048-11392185 Caenorhabditis elegans
Exon29737   228   I: 11393292-11393519 Caenorhabditis elegans
Exon29739   154   I: 11393722-11393875 Caenorhabditis elegans
Exon29741   132   I: 11394747-11394878 Caenorhabditis elegans
Exon29743   81   I: 11394927-11395007 Caenorhabditis elegans
Exon29745   109   I: 11395069-11395177 Caenorhabditis elegans
Exon29747   179   I: 11396254-11396432 Caenorhabditis elegans
Exon29749   93   I: 11396568-11396660 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y53H1C.1a.1 11388682 11396660 -1

1 Sequence

Length
2087

1 Sequence Ontology Term

Identifier Name Description
transcript