WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y53H1A.5a.1 Sequence Name  Y53H1A.5a.1
Length (nt)  979   Chromosome Location  I: 11224836-11233332
Chromosome . Primary Identifier  I Chromosome Location . Start  11224836
Chromosome Location . End  11233332 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53H1A.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00043056 nfya-2 Y53H1A.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53H1A.5a Y53H1A.5a 846   I: 11224886-11224887

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y53H1A.5a.1 11224836 11233332 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon29450   52   I: 11224836-11224887 Caenorhabditis elegans
Exon29451   82   I: 11224947-11225028 Caenorhabditis elegans
Exon29453   76   I: 11225080-11225155 Caenorhabditis elegans
Exon29455   74   I: 11225204-11225277 Caenorhabditis elegans
Exon29457   87   I: 11227368-11227454 Caenorhabditis elegans
Exon29459   67   I: 11227510-11227576 Caenorhabditis elegans
Exon29461   225   I: 11232560-11232784 Caenorhabditis elegans
Exon29464   97   I: 11232843-11232939 Caenorhabditis elegans
Exon29469   219   I: 11233114-11233332 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y53H1A.5a.1 11224836 11233332 1

1 Sequence

Length
979

1 Sequence Ontology Term

Identifier Name Description
transcript