WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55A3.3.1 Sequence Name  F55A3.3.1
Length (nt)  3351   Chromosome Location  I: 10789130-10793152
Chromosome . Primary Identifier  I Chromosome Location . Start  10789130
Chromosome Location . End  10793152 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55A3.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018849 spt-16 F55A3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55A3.3 F55A3.3 3093   I: 10789137-10789208

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F55A3.3.1 10789130 10793152 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon28837   79   I: 10789130-10789208 Caenorhabditis elegans
Exon28838   93   I: 10789257-10789349 Caenorhabditis elegans
Exon28839   456   I: 10789400-10789855 Caenorhabditis elegans
Exon28840   1442   I: 10790217-10791658 Caenorhabditis elegans
Exon28841   427   I: 10791819-10792245 Caenorhabditis elegans
Exon28842   854   I: 10792299-10793152 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F55A3.3.1 10789130 10793152 1

1 Sequence

Length
3351

1 Sequence Ontology Term

Identifier Name Description
transcript