WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y106G6H.5.1 Sequence Name  Y106G6H.5.1
Length (nt)  2799   Chromosome Location  I: 10438075-10443563
Chromosome . Primary Identifier  I Chromosome Location . Start  10438075
Chromosome Location . End  10443563 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y106G6H.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013718 pdpr-1 Y106G6H.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y106G6H.5 Y106G6H.5 2568   I: 10438288-10438464

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y106G6H.5.1 10438075 10443563 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon27883   390   I: 10438075-10438464 Caenorhabditis elegans
Exon27884   375   I: 10439138-10439512 Caenorhabditis elegans
Exon27885   444   I: 10439941-10440384 Caenorhabditis elegans
Exon27886   620   I: 10440830-10441449 Caenorhabditis elegans
Exon27887   153   I: 10441856-10442008 Caenorhabditis elegans
Exon27888   127   I: 10442056-10442182 Caenorhabditis elegans
Exon27889   125   I: 10442230-10442354 Caenorhabditis elegans
Exon27890   249   I: 10442403-10442651 Caenorhabditis elegans
Exon27891   137   I: 10442849-10442985 Caenorhabditis elegans
Exon27892   111   I: 10443031-10443141 Caenorhabditis elegans
Exon27893   68   I: 10443496-10443563 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y106G6H.5.1 10438075 10443563 -1

1 Sequence

Length
2799

1 Sequence Ontology Term

Identifier Name Description
transcript