WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0379.4a.1 Sequence Name  B0379.4a.1
Length (nt)  1219   Chromosome Location  I: 10086437-10102012
Chromosome . Primary Identifier  I Chromosome Location . Start  10086437
Chromosome Location . End  10102012 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0379.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007054 scpl-1 B0379.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0379.4a B0379.4a 1038   I: 10086534-10086608

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0379.4a.1 10086437 10102012 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon27101   172   I: 10086437-10086608 Caenorhabditis elegans
Exon27103   81   I: 10086788-10086868 Caenorhabditis elegans
Exon27106   86   I: 10086951-10087036 Caenorhabditis elegans
Exon27109   100   I: 10087389-10087488 Caenorhabditis elegans
Exon27112   150   I: 10087843-10087992 Caenorhabditis elegans
Exon27115   108   I: 10088388-10088495 Caenorhabditis elegans
Exon27119   111   I: 10089862-10089972 Caenorhabditis elegans
Exon27121   107   I: 10091426-10091532 Caenorhabditis elegans
Exon27124   99   I: 10093679-10093777 Caenorhabditis elegans
Exon27129   97   I: 10100664-10100760 Caenorhabditis elegans
Exon27130   108   I: 10101905-10102012 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0379.4a.1 10086437 10102012 -1

1 Sequence

Length
1219

1 Sequence Ontology Term

Identifier Name Description
transcript