WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0379.4c.1 Sequence Name  B0379.4c.1
Length (nt)  1030   Chromosome Location  I: 10086265-10088760
Chromosome . Primary Identifier  I Chromosome Location . Start  10086265
Chromosome Location . End  10088760 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0379.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007054 scpl-1 B0379.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0379.4c B0379.4c 753   I: 10086534-10086608

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:B0379.4c.1 10086265 10088760 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon27100   344   I: 10086265-10086608 Caenorhabditis elegans
Exon27105   81   I: 10086788-10086868 Caenorhabditis elegans
Exon27108   86   I: 10086951-10087036 Caenorhabditis elegans
Exon27111   100   I: 10087389-10087488 Caenorhabditis elegans
Exon27114   150   I: 10087843-10087992 Caenorhabditis elegans
Exon27117   108   I: 10088388-10088495 Caenorhabditis elegans
Exon27118   161   I: 10088600-10088760 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:B0379.4c.1 10086265 10088760 -1

1 Sequence

Length
1030

1 Sequence Ontology Term

Identifier Name Description
transcript