WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52F12.1b.1 Sequence Name  F52F12.1b.1
Length (nt)  1833   Chromosome Location  I: 9888357-9891544
Chromosome . Primary Identifier  I Chromosome Location . Start  9888357
Chromosome Location . End  9891544 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52F12.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003842 oct-1 F52F12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52F12.1b F52F12.1b 1707   I: 9888450-9888577

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F52F12.1b.1 9888357 9891544 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon26650   221   I: 9888357-9888577 Caenorhabditis elegans
Exon26652   133   I: 9888743-9888875 Caenorhabditis elegans
Exon26654   397   I: 9888954-9889350 Caenorhabditis elegans
Exon26656   116   I: 9889402-9889517 Caenorhabditis elegans
Exon26658   187   I: 9889566-9889752 Caenorhabditis elegans
Exon26660   109   I: 9890061-9890169 Caenorhabditis elegans
Exon26662   259   I: 9890216-9890474 Caenorhabditis elegans
Exon26664   79   I: 9890880-9890958 Caenorhabditis elegans
Exon26666   83   I: 9891017-9891099 Caenorhabditis elegans
Exon26668   92   I: 9891198-9891289 Caenorhabditis elegans
Exon26670   79   I: 9891335-9891413 Caenorhabditis elegans
Exon26672   78   I: 9891467-9891544 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F52F12.1b.1 9888357 9891544 -1

1 Sequence

Length
1833

1 Sequence Ontology Term

Identifier Name Description
transcript