WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52F12.1a.1 Sequence Name  F52F12.1a.1
Length (nt)  1897   Chromosome Location  I: 9888356-9892223
Chromosome . Primary Identifier  I Chromosome Location . Start  9888356
Chromosome Location . End  9892223 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52F12.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003842 oct-1 F52F12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52F12.1a F52F12.1a 1758   I: 9888450-9888577

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F52F12.1a.1 9888356 9892223 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon26649   222   I: 9888356-9888577 Caenorhabditis elegans
Exon26651   133   I: 9888743-9888875 Caenorhabditis elegans
Exon26653   397   I: 9888954-9889350 Caenorhabditis elegans
Exon26655   116   I: 9889402-9889517 Caenorhabditis elegans
Exon26657   187   I: 9889566-9889752 Caenorhabditis elegans
Exon26659   109   I: 9890061-9890169 Caenorhabditis elegans
Exon26661   259   I: 9890216-9890474 Caenorhabditis elegans
Exon26663   79   I: 9890880-9890958 Caenorhabditis elegans
Exon26665   83   I: 9891017-9891099 Caenorhabditis elegans
Exon26667   92   I: 9891198-9891289 Caenorhabditis elegans
Exon26669   79   I: 9891335-9891413 Caenorhabditis elegans
Exon26671   78   I: 9891467-9891544 Caenorhabditis elegans
Exon26673   63   I: 9892161-9892223 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F52F12.1a.1 9888356 9892223 -1

1 Sequence

Length
1897

1 Sequence Ontology Term

Identifier Name Description
transcript